TCRT August 2011

category image Volume 10
No. 4 (295-390)
August 2011
ISSN 1533-0338
Digital Tomosynthesis

Ultra-Fast Digital Tomosynthesis Reconstruction Using General-Purpose GPU Programming for Image-Guided Radiation Therapy (295-306)

The purpose of this work is to demonstrate an ultra-fast reconstruction technique for digital tomosynthesis (DTS) imaging based on the algorithm proposed by Feldkamp, Davis, and Kress (FDK) using standard general-purpose graphics processing unit (GPGPU) programming interface. To this end, the FDK-based DTS algorithm was programmed “in-house” with C language with utilization of 1) GPU and 2) central processing unit (CPU) cards. The GPU card consisted of 480 processing cores (2 3 240 dual chip) with 1,242 MHz processing clock speed and 1,792 MB memory space. In terms of CPU hardware, we used 2.68 GHz clock speed, 12.0 GB DDR3 RAM, on a 64-bit OS. The performance of proposed algorithm was tested on twenty-five patient cases (5 lung, 5 liver, 10 prostate, and 5 head-and-neck) scanned either with a full-fan or half-fan mode on our cone-beam computed tomography (CBCT) system. For the full-fan scans, the projections from 157.5°-202.5° (45°-scan) were used to reconstruct coronal DTS slices, whereas for the half-fan scans, the projections from both 157.5°-202.5° and 337.5°-22.5° (2 3 45°-scan) were used to reconstruct larger FOV coronal DTS slices. For this study, we chose 45°-scan angle that contained ~80 projections for the full-fan and ~160 projections with 2 3 45°-scan angle for the half-fan mode, each with 1024 3 768 pixels with 32-bit precision. Absolute pixel value differences, profiles, and contrast-to-noise ratio (CNR) calculations were performed to compare and evaluate the images reconstructed using GPU- and CPU-based implementations. The time dependence on the reconstruction volume was also tested with (512 3 512) 3 16, 32, 64, 128, and 256 slices. In the end, the GPU-based implementation achieved, at most, 1.3 and 2.5 seconds to complete full reconstruction of 512 3 512 3 256 volume, for the full-fan and half-fan modes, respectively. In turn, this meant that our implementation can process > 13 projections-per-second (pps) and > 18 pps for the full-fan and half-fan modes, respectively. Since commercial CBCT system nominally acquires 11 pps (with 1 gantry-revolution-per-minute), our GPU-based implementation is sufficient to handle the incoming projections data as they are acquired and reconstruct the entire volume immediately after completing the scan. In addition, on increasing the number of slices (hence volume) to be reconstructed from 16 to 256, only minimal increases in reconstruction time were observed for the GPU-based implementation where from 0.73 to 1.27 seconds and 1.42 to 2.47 seconds increase were observed for the full-fan and half-fan modes, respectively. This resulted in speed improvement of up to 87 times compared with the CPU-based implementation (for 256 slices case), with visually identical images and small pixel-value discrepancies (< 6.3%), and CNR differences (< 2.3%). With this achievement, we have shown that time allocation for DTS image reconstruction is virtually eliminated and that clinical implementation of this approach has become quite appealing. In addition, with the speed achievement, further image processing and real-time applications that was prohibited prior due to time restrictions can now be tempered with.

Key words: Digital tomosynthesis; GPU programming; FDK; on-board imager; IGRT.

This article can be cited as:
Park, J.C., Park, S.H., Kim, J.S., Han, Y., Cho, M.K., Kim, H.K., Liu, Z., Jiang, Z.B., Song, B., Song, W.Y. Ultra-Fast Digital Tomosynthesis Reconstruction Using General-Purpose GPU Programming for Image-Guided Radiation Therapy Technol Cancer Res Treat. 10, 295-306 (2011).

Justin C. Park, M.Sc.1,5
Sung Ho Park, Ph.D.2
Jin Sung Kim, Ph.D.3
Youngyih Han, Ph.D.3
Min Kook Cho, Ph.D.4
Ho Kyung Kim, Ph.D.4
Zhaowei Liu, Ph.D.5
Steve B. Jiang, Ph.D.1
Bongyong Song, Ph.D.1
William Y. Song, Ph.D.1

1Department of Radiation Oncology, Center for Advanced Radiotherapy Technologies, University of California San Diego, La Jolla, California
2Department of Radiation Oncology, Asan Medical Center, College of Medicine, University of Ulsan, Seoul, South Korea
3Department of Radiation Oncology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea
4Department of Mechanical Engineering, Pusan National University, Busan, South Korea
5Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, California

mp.jinsung.kim@samsung.com

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